Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | CDQ89_01185 | O59256 | Negative | 241594 - 242649 | 38557.2 |
| llm class flavin-dependent oxidoreductase | CDQ89_01190 | P9WKP0 | Positive | 242738 - 243598 | 30578.7 |
| hypothetical protein | CDQ89_01195 | Not Available | Negative | 243595 - 244110 | 17438.7 |
| arabinosyltransferase | CDQ89_01200 | P71486 | Negative | 244255 - 247452 | 114629.0 |
| arabinosyltransferase | CDQ89_01205 | P71485 | Negative | 247449 - 250775 | 117314.0 |
| fha domain-containing protein | CDQ89_01210 | P66800 | Positive | 250953 - 252107 | 41242.4 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | CDQ89_01215 | Not Available | Negative | 252111 - 252734 | 22497.3 |
| hypothetical protein | CDQ89_01220 | Not Available | Positive | 252917 - 253129 | 7207.9 |
| arabinosyltransferase | CDQ89_01225 | Q7TVN4 | Negative | 253188 - 256463 | 116567.0 |
| arabinofuranosyltransferase | CDQ89_01230 | Q9CDA6 | Negative | 256470 - 258563 | 74692.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



