Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | CDQ89_13295 | P76222 | Negative | 2796986 - 2797555 | 20803.8 |
| non-ribosomal peptide synthetase | CDQ89_13300 | P45745 | Negative | 2797676 - 2809759 | 430522.0 |
| mbth family protein | CDQ89_13305 | P59965 | Negative | 2809780 - 2810010 | 8685.99 |
| hypothetical protein | CDQ89_13310 | P0A5K3 | Positive | 2810902 - 2811321 | 15131.2 |
| rnd family transporter | CDQ89_13315 | P9WJV2 | Positive | 2811318 - 2814209 | 104982.0 |
| rnd family transporter | CDQ89_13320 | P9WJV2 | Positive | 2814268 - 2817186 | 107667.0 |
| daunorubicin resistance protein drra family abc transporter atp-binding protein | CDQ89_13325 | P9WQL8 | Positive | 2817399 - 2818346 | 33497.3 |
| abc transporter permease | CDQ89_13330 | P9WG22 | Positive | 2818343 - 2819083 | 25962.4 |
| abc transporter permease | CDQ89_13335 | P9WG20 | Positive | 2819182 - 2819874 | 24645.2 |
| acyltransferase | CDQ89_13340 | P23214 | Negative | 2820090 - 2821256 | 42287.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



