Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase family deazaflavin-dependent oxidoreductase | CDQ89_13195 | P9WP10 | Negative | 2772986 - 2773423 | 16330.3 |
| hypothetical protein | CDQ89_13200 | Not Available | Negative | 2773433 - 2774221 | 29837.3 |
| lysophospholipid acyltransferase | CDQ89_13205 | P65735 | Negative | 2774374 - 2776275 | 70257.2 |
| long-chain fatty acid--coa ligase | CDQ89_13210 | P9WQ52 | Negative | 2776272 - 2778092 | 65053.0 |
| helix-turn-helix domain-containing protein | CDQ89_13215 | P13111 | Negative | 2778114 - 2778530 | 15004.3 |
| ppox class f420-dependent oxidoreductase | CDQ89_13220 | Not Available | Positive | 2778589 - 2779035 | 16860.4 |
| dna polymerase iii subunit alpha | CDQ89_13225 | P63978 | Negative | 2779207 - 2782740 | 128891.0 |
| srpbcc family protein | CDQ89_13230 | P9WLU6 | Negative | 2782805 - 2783236 | 15424.4 |
| rna polymerase sigma factor sigm | CDQ89_13235 | B0D8R3 | Negative | 2783325 - 2784127 | 28561.3 |
| rna polymerase sigma factor sigm | CDQ89_13240 | P9WGS0 | Negative | 2784132 - 2785149 | 37253.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



