Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CDQ89_13095 | Not Available | Positive | 2747183 - 2749015 | 65858.7 |
| hypothetical protein | CDQ89_13100 | Not Available | Positive | 2749019 - 2749381 | 12572.0 |
| hypothetical protein | CDQ89_13105 | Not Available | Positive | 2749378 - 2750742 | 48607.2 |
| hamp domain-containing protein | CDQ89_13110 | P0A4Y1 | Positive | 2750794 - 2752986 | 79295.5 |
| mechanosensitive ion channel | CDQ89_13115 | O07594 | Positive | 2752983 - 2754404 | 50920.0 |
| 2'-5' rna ligase family protein | CDQ89_13120 | Not Available | Negative | 2754482 - 2754991 | 17997.1 |
| atp-dependent dethiobiotin synthetase biod | CDQ89_13125 | A0QHJ8 | Negative | 2754991 - 2755668 | 22602.3 |
| 8-amino-7-oxononanoate synthase | CDQ89_13130 | Q740R7 | Negative | 2755673 - 2756818 | 39327.2 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | CDQ89_13135 | P45488 | Negative | 2756823 - 2758139 | 46748.3 |
| hypothetical protein | CDQ89_13140 | Not Available | Positive | 2758202 - 2758669 | 16435.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



