Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antar domain-containing response regulator | CDQ89_12895 | P9WGM2 | Negative | 2708036 - 2708650 | 22744.5 |
| Trna-leu | Not Available | Not Available | Positive | 2708745 - 2708821 | Not Available |
| hypothetical protein | CDQ89_12905 | Not Available | Negative | 2709119 - 2709364 | 8065.98 |
| adenylate/guanylate cyclase domain-containing protein | CDQ89_12910 | P0A4Y1 | Positive | 2709513 - 2710844 | 47860.1 |
| hded family acid-resistance protein | CDQ89_12915 | Not Available | Positive | 2710872 - 2711465 | 20444.9 |
| cytochrome ubiquinol oxidase subunit i | CDQ89_12920 | P94364 | Positive | 2711552 - 2713024 | 54503.4 |
| rna polymerase sigma factor sigm | CDQ89_12925 | P94365 | Positive | 2713058 - 2714096 | 36865.8 |
| thiol reductant abc exporter subunit cydd | CDQ89_12930 | P94366 | Positive | 2714159 - 2715781 | 55731.6 |
| thiol reductant abc exporter subunit cydc | CDQ89_12935 | P23886 | Positive | 2715816 - 2717453 | 55926.2 |
| duf2156 domain-containing protein | CDQ89_12940 | O06136 | Negative | 2717460 - 2718857 | 51409.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



