Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna ligase | CDQ89_12845 | Q9I1X7 | Positive | 2696237 - 2697235 | 37750.2 |
| fpg/nei family dna glycosylase | CDQ89_12850 | B0TER7 | Positive | 2697235 - 2698023 | 29244.4 |
| hypothetical protein | CDQ89_12855 | Not Available | Positive | 2698033 - 2698446 | 14368.0 |
| dephospho-coa kinase | CDQ89_12860 | Q740M4 | Negative | 2698457 - 2699680 | 44152.3 |
| 30s ribosomal protein s1 | CDQ89_12865 | P9WH42 | Negative | 2699693 - 2701135 | 53024.7 |
| carotenoid oxygenase family protein | CDQ89_12870 | P74334 | Negative | 2701239 - 2702765 | 56457.9 |
| tetr/acrr family transcriptional regulator | CDQ89_12875 | P9WMD8 | Negative | 2702783 - 2703412 | 22483.6 |
| dna polymerase i | CDQ89_12880 | P0A551 | Negative | 2703425 - 2706085 | 96904.5 |
| zn-ribbon domain-containing ob-fold protein | CDQ89_12885 | Q58947 | Positive | 2706274 - 2706714 | 15974.0 |
| lipid-transfer protein | CDQ89_12890 | O26884 | Positive | 2706711 - 2707925 | 42523.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



