Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CDQ89_12795 | Not Available | Positive | 2682943 - 2684526 | 57570.6 |
| mgtc/sapb family protein | CDQ89_12800 | P0AFV3 | Positive | 2684579 - 2685301 | 24748.0 |
| rna polymerase sigma factor sigm | CDQ89_12805 | P9WJX2 | Negative | 2685369 - 2686373 | 33856.2 |
| excinuclease abc subunit b | CDQ89_12810 | P67423 | Negative | 2686428 - 2688521 | 78215.3 |
| hypothetical protein | CDQ89_12815 | Not Available | Negative | 2688684 - 2689190 | 19146.2 |
| rna polymerase sigma factor sigm | CDQ89_12820 | P9WLL0 | Negative | 2689460 - 2690244 | 28608.0 |
| hypothetical protein | CDQ89_12825 | Not Available | Negative | 2690247 - 2690555 | 10256.0 |
| serine/threonine protein kinase | CDQ89_12830 | Q7TZN1 | Negative | 2690792 - 2692852 | 72034.9 |
| atp-binding cassette domain-containing protein | CDQ89_12835 | O65934 | Positive | 2693102 - 2695678 | 91468.1 |
| duf402 domain-containing protein | CDQ89_12840 | Not Available | Positive | 2695776 - 2696240 | 17637.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



