Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rv1355c family protein | CDQ89_12745 | P9WM10 | Positive | 2670926 - 2673055 | 77293.3 |
| rna polymerase sigma factor sigm | CDQ89_12750 | P9WM12 | Positive | 2673168 - 2675017 | 66089.0 |
| class i sam-dependent methyltransferase | CDQ89_12755 | A0A482NB13 | Negative | 2675046 - 2675645 | 21401.3 |
| cytochrome p450 | CDQ89_12760 | C9K1X7 | Negative | 2675722 - 2677092 | 50506.9 |
| hypothetical protein | CDQ89_12765 | P9WM08 | Negative | 2677156 - 2677875 | 26362.1 |
| hypothetical protein | CDQ89_12770 | A5U697 | Positive | 2678250 - 2678486 | 8543.58 |
| rna polymerase sigma factor sigm | CDQ89_12775 | P63381 | Negative | 2678520 - 2681402 | 105289.0 |
| mbl fold metallo-hydrolase | CDQ89_12780 | P75849 | Positive | 2681510 - 2682196 | 24098.2 |
| universal stress protein | CDQ89_12785 | P9WFC8 | Negative | 2682214 - 2682657 | 15438.3 |
| rna polymerase sigma factor sigm | CDQ89_12790 | Not Available | Negative | 2682630 - 2682818 | 7071.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



