Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate/guanylate cyclase domain-containing protein | CDQ89_12695 | P9WMU8 | Negative | 2659968 - 2660888 | 32670.0 |
| duf2236 domain-containing protein | CDQ89_12700 | Not Available | Positive | 2661104 - 2662171 | 40469.2 |
| rna methyltransferase | CDQ89_12705 | Q9F5K6 | Negative | 2662158 - 2662949 | 26971.6 |
| 50s ribosomal protein l20 | CDQ89_12710 | A0QHC1 | Negative | 2662980 - 2663375 | 14659.6 |
| 50s ribosomal protein l35 | CDQ89_12715 | A0QHC2 | Negative | 2663456 - 2663650 | 7309.86 |
| translation initiation factor if-3 | CDQ89_12720 | P65136 | Negative | 2663693 - 2664298 | 22265.5 |
| bifunctional lysylphosphatidylglycerol synthetase/lysine--trna ligase lysx | CDQ89_12725 | Q740J9 | Positive | 2664539 - 2668120 | 130624.0 |
| esterase family protein | CDQ89_12730 | P35866 | Positive | 2668268 - 2669683 | 49725.4 |
| hypothetical protein | CDQ89_12735 | Not Available | Positive | 2669707 - 2670108 | 15281.9 |
| tetr/acrr family transcriptional regulator | CDQ89_12740 | O86312 | Positive | 2670179 - 2670838 | 23722.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



