Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate synthase | CDQ89_12645 | P61525 | Negative | 2648265 - 2649461 | 43786.7 |
| arginine repressor | CDQ89_12650 | Q740I4 | Negative | 2649489 - 2649983 | 16899.1 |
| ornithine carbamoyltransferase | CDQ89_12655 | Q740I5 | Negative | 2649980 - 2650909 | 33564.6 |
| acetylornithine transaminase | CDQ89_12660 | P63569 | Negative | 2650906 - 2652135 | 41639.0 |
| acetylglutamate kinase | CDQ89_12665 | Q740I7 | Negative | 2652230 - 2653117 | 31014.7 |
| bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argj | CDQ89_12670 | P62063 | Negative | 2653114 - 2654328 | 40931.4 |
| rna polymerase sigma factor sigm | CDQ89_12675 | Q740I9 | Negative | 2654325 - 2655367 | 37497.5 |
| phenylalanine--trna ligase subunit beta | CDQ89_12680 | Q740J0 | Negative | 2655415 - 2657901 | 87776.1 |
| phenylalanine--trna ligase subunit alpha | CDQ89_12685 | Q740J1 | Negative | 2657901 - 2658944 | 37910.9 |
| hypothetical protein | CDQ89_12690 | Not Available | Negative | 2659140 - 2659958 | 28176.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



