Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CDQ89_12545 | Not Available | Positive | 2617868 - 2618368 | 17969.2 |
| gluconate 2-dehydrogenase subunit 3 family protein | CDQ89_12550 | Not Available | Positive | 2618376 - 2619122 | 27655.2 |
| gmc family oxidoreductase | CDQ89_12555 | Q3YAT3 | Positive | 2619122 - 2620819 | 61956.0 |
| glycoside hydrolase family 15 protein | CDQ89_12560 | A0R0W9 | Positive | 2620812 - 2622608 | 65016.0 |
| sdr family oxidoreductase | CDQ89_12565 | O32291 | Positive | 2622639 - 2623661 | 36286.9 |
| mandelate racemase | CDQ89_12570 | H2IFX0 | Positive | 2623658 - 2624764 | 40218.5 |
| sdr family oxidoreductase | CDQ89_12575 | P55541 | Negative | 2624866 - 2625636 | 27024.1 |
| mycofactocin-coupled sdr family oxidoreductase | CDQ89_12580 | A0R518 | Negative | 2625652 - 2626464 | 28119.6 |
| hypothetical protein | CDQ89_12585 | Not Available | Negative | 2626471 - 2627535 | 38645.5 |
| sulfotransferase | CDQ89_12590 | Not Available | Negative | 2627543 - 2628679 | 42438.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



