Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf732 domain-containing protein | CDQ89_12495 | O33192 | Negative | 2607645 - 2608013 | 12500.5 |
| tyrosine--trna ligase | CDQ89_12500 | Q740F5 | Negative | 2608103 - 2609368 | 46303.0 |
| dna-3-methyladenine glycosylase | CDQ89_12505 | Q740F6 | Negative | 2609380 - 2610015 | 22208.5 |
| ammonium transporter | CDQ89_12510 | P63520 | Positive | 2610102 - 2611379 | 44051.4 |
| abc transporter atp-binding protein | CDQ89_12515 | P0A9U1 | Positive | 2611491 - 2612252 | 27155.9 |
| abc transporter permease | CDQ89_12520 | P0AFQ0 | Positive | 2612288 - 2613004 | 25848.7 |
| helix-turn-helix transcriptional regulator | CDQ89_12525 | Q0S7V2 | Positive | 2613023 - 2613646 | 22155.9 |
| trm112 family protein | CDQ89_12530 | A5CVZ8 | Negative | 2613612 - 2613827 | 8107.88 |
| alpha/beta fold hydrolase | CDQ89_12535 | O35488 | Negative | 2613824 - 2616862 | 108604.0 |
| hypothetical protein | CDQ89_12540 | Not Available | Negative | 2617007 - 2617375 | 12640.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



