Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2510 domain-containing protein | CDQ89_12395 | Not Available | Positive | 2589154 - 2589819 | 23534.5 |
| Trna-pro | Not Available | Not Available | Positive | 2589825 - 2589901 | Not Available |
| rna polymerase sigma factor sigm | CDQ89_12405 | Q740D6 | Negative | 2590106 - 2591463 | 48985.8 |
| (d)cmp kinase | CDQ89_12410 | Q740D7 | Negative | 2591460 - 2592146 | 24181.7 |
| rrna pseudouridine synthase | CDQ89_12415 | P9WHQ0 | Negative | 2592143 - 2592886 | 26803.6 |
| smc-scp complex subunit scpb | CDQ89_12420 | A4J3L6 | Negative | 2592886 - 2593593 | 25194.8 |
| segregation/condensation protein a | CDQ89_12425 | B8FPL1 | Negative | 2593590 - 2594408 | 30174.2 |
| para family protein | CDQ89_12430 | P9WLT0 | Negative | 2594405 - 2595268 | 31317.9 |
| o-methyltransferase | CDQ89_12435 | L0TAD5 | Positive | 2595505 - 2596257 | 27533.8 |
| site-specific tyrosine recombinase xerd | CDQ89_12440 | P67637 | Negative | 2596283 - 2597224 | 33768.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



