Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin reductase | CDQ89_12345 | Q6F9F5 | Positive | 2566533 - 2567030 | 18279.5 |
| pyrimidine reductase family protein | CDQ89_12350 | O28272 | Positive | 2567033 - 2567743 | 25151.6 |
| hypothetical protein | CDQ89_12355 | Not Available | Positive | 2567909 - 2568250 | 12624.6 |
| mfs transporter | CDQ89_12360 | P76230 | Negative | 2568495 - 2569985 | 53137.0 |
| rna polymerase sigma factor sigm | CDQ89_12365 | Not Available | Negative | 2569989 - 2571561 | 58326.8 |
| n-acetylglutaminylglutamine amidotransferase | CDQ89_12370 | P54420 | Negative | 2571558 - 2573363 | 65456.3 |
| amino acid adenylation domain-containing protein | CDQ89_12375 | P45745 | Negative | 2573523 - 2586341 | 457488.0 |
| mbth family protein | CDQ89_12380 | P59965 | Negative | 2586398 - 2586616 | 8283.62 |
| gap family protein | CDQ89_12385 | Q3L890 | Positive | 2587769 - 2588554 | 27442.3 |
| duf4383 domain-containing protein | CDQ89_12390 | Not Available | Positive | 2588671 - 2589105 | 15292.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



