Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl dehydratase | CDQ89_12295 | D1AB77 | Positive | 2555760 - 2556161 | 15017.0 |
| hypothetical protein | CDQ89_12300 | Not Available | Positive | 2556158 - 2556331 | 6298.57 |
| nad(p)/fad-dependent oxidoreductase | CDQ89_12305 | Q47PU3 | Positive | 2556328 - 2557923 | 58912.4 |
| amp-binding protein | CDQ89_12310 | B2HHZ8 | Positive | 2557920 - 2559539 | 58052.0 |
| rna polymerase sigma factor sigm | CDQ89_12315 | Not Available | Negative | 2559542 - 2560961 | 53416.3 |
| padr family transcriptional regulator | CDQ89_12320 | P94443 | Negative | 2561073 - 2561753 | 25665.3 |
| tigr03619 family f420-dependent llm class oxidoreductase | CDQ89_12325 | P9WKN4 | Positive | 2561815 - 2562735 | 33960.9 |
| hypothetical protein | CDQ89_12330 | Not Available | Negative | 2562737 - 2563555 | 30088.4 |
| rna polymerase sigma factor sigm | CDQ89_12335 | Not Available | Positive | 2563678 - 2564828 | 38730.9 |
| multicopper oxidase domain-containing protein | CDQ89_12340 | I6WZK7 | Negative | 2564855 - 2566303 | 52633.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



