Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| csbd family protein | CDQ89_12245 | Not Available | Positive | 2545591 - 2545824 | 8195.41 |
| sdr family oxidoreductase | CDQ89_12250 | Q9X248 | Negative | 2545919 - 2546764 | 30245.6 |
| alpha/beta hydrolase | CDQ89_12255 | O53424 | Positive | 2546944 - 2547996 | 37825.2 |
| atp-binding cassette domain-containing protein | CDQ89_12260 | O65934 | Positive | 2548156 - 2550720 | 89825.3 |
| hypothetical protein | CDQ89_12265 | Not Available | Negative | 2550787 - 2550951 | 6181.56 |
| acyl-coa dehydrogenase | CDQ89_12270 | I6YCA3 | Positive | 2551267 - 2552445 | 43698.1 |
| acyl-coa/acyl-acp dehydrogenase | CDQ89_12275 | A0R502 | Positive | 2552465 - 2553601 | 39707.1 |
| maoc family dehydratase | CDQ89_12280 | A8LC73 | Positive | 2553594 - 2554094 | 18255.4 |
| maoc family dehydratase | CDQ89_12285 | A9WC41 | Positive | 2554121 - 2554558 | 15868.7 |
| thiolase family protein | CDQ89_12290 | D1AB74 | Positive | 2554555 - 2555757 | 41898.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



