Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | CDQ89_12195 | P77300 | Negative | 2534216 - 2535052 | 30015.8 |
| fad-dependent oxidoreductase | CDQ89_12200 | Q59327 | Negative | 2535195 - 2536703 | 52580.2 |
| biphenyl-2,3-diol 1,2-dioxygenase | CDQ89_12205 | Q9KWQ5 | Negative | 2536667 - 2537575 | 33245.3 |
| hydroxylase | CDQ89_12210 | O69349 | Negative | 2537586 - 2538770 | 42933.4 |
| mycofactocin-coupled sdr family oxidoreductase | CDQ89_12215 | Q9RA05 | Negative | 2538899 - 2539705 | 27497.8 |
| nad(p)/fad-dependent oxidoreductase | CDQ89_12220 | Q47PU3 | Negative | 2539705 - 2541330 | 59349.0 |
| mycofactocin-coupled sdr family oxidoreductase | CDQ89_12225 | Q9RA05 | Positive | 2541462 - 2542310 | 29698.7 |
| alpha/beta fold hydrolase | CDQ89_12230 | Q9KWQ6 | Negative | 2542362 - 2543267 | 32426.7 |
| wax ester/triacylglycerol synthase family o-acyltransferase | CDQ89_12235 | P9WKB8 | Negative | 2543335 - 2544729 | 49772.5 |
| nuclear transport factor 2 family protein | CDQ89_12240 | Q53216 | Negative | 2544919 - 2545341 | 15591.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



