Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor sigm | CDQ89_12095 | P38135 | Negative | 2514334 - 2515960 | 59187.6 |
| hypothetical protein | CDQ89_12100 | Not Available | Negative | 2516027 - 2516545 | 18995.6 |
| molybdopterin-dependent oxidoreductase | CDQ89_12105 | Q9S850 | Negative | 2516538 - 2517815 | 45482.9 |
| rna polymerase sigma factor sigm | CDQ89_12110 | P9WM56 | Positive | 2518017 - 2519204 | 42170.2 |
| is3 family transposase | CDQ89_12115 | P59800 | Negative | 2519238 - 2520508 | 47210.3 |
| rna polymerase sigma factor sigm | CDQ89_12120 | P9WM57 | Positive | 2520563 - 2520772 | 7832.65 |
| 3-ketosteroid-delta-1-dehydrogenase | CDQ89_12125 | P71864 | Negative | 2520769 - 2522514 | 61756.6 |
| 3-ketosteroid-9-alpha-hydroxylase subunit a | CDQ89_12130 | F1CMX0 | Positive | 2522616 - 2523728 | 42159.6 |
| ferredoxin | CDQ89_12135 | Not Available | Positive | 2523731 - 2524015 | 10355.6 |
| sdr family nad(p)-dependent oxidoreductase | CDQ89_12140 | Q96LJ7 | Positive | 2524030 - 2524836 | 28189.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



