Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase p family protein | CDQ89_11995 | P54518 | Positive | 2492885 - 2494114 | 44341.5 |
| aminopeptidase p family protein | CDQ89_12000 | O31689 | Positive | 2494104 - 2495234 | 39561.5 |
| rna polymerase sigma factor sigm | CDQ89_12005 | P9WLT2 | Positive | 2495310 - 2496673 | 47590.4 |
| excalibur calcium-binding domain-containing protein | CDQ89_12010 | O32001 | Negative | 2496715 - 2496897 | 6373.44 |
| hypothetical protein | CDQ89_12015 | Not Available | Negative | 2497011 - 2498297 | 47319.9 |
| sdr family nad(p)-dependent oxidoreductase | CDQ89_12020 | Q6GDV6 | Negative | 2498302 - 2499063 | 26454.8 |
| coa transferase | CDQ89_12025 | P95149 | Negative | 2499060 - 2501432 | 84144.9 |
| enoyl-coa hydratase/isomerase family protein | CDQ89_12030 | P95279 | Negative | 2501452 - 2502420 | 36565.2 |
| mycofactocin-coupled sdr family oxidoreductase | CDQ89_12035 | A0R518 | Negative | 2502457 - 2503293 | 29662.6 |
| cytochrome p450 | CDQ89_12040 | P9WPN4 | Negative | 2503293 - 2504495 | 44964.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



