Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | CDQ89_11945 | P9WMD4 | Positive | 2483965 - 2484639 | 24736.4 |
| cutinase family protein | CDQ89_11950 | O06793 | Positive | 2484844 - 2485491 | 22050.5 |
| rna polymerase sigma factor sigm | CDQ89_11955 | Not Available | Negative | 2485525 - 2486423 | 30457.5 |
| rna polymerase sigma factor sigf | CDQ89_11960 | P9WGI2 | Positive | 2487154 - 2487963 | 30367.3 |
| hypothetical protein | CDQ89_11965 | Not Available | Positive | 2488090 - 2488725 | 20873.2 |
| hypothetical protein | CDQ89_11970 | Not Available | Positive | 2488750 - 2489241 | 17274.8 |
| nitroreductase family deazaflavin-dependent oxidoreductase | CDQ89_11975 | P9WP10 | Negative | 2489253 - 2489729 | 17488.4 |
| tetr family transcriptional regulator | CDQ89_11980 | Not Available | Positive | 2489913 - 2490647 | 26450.6 |
| cytochrome p450 | CDQ89_11985 | P18327 | Positive | 2490644 - 2491873 | 45362.2 |
| sdr family nad(p)-dependent oxidoreductase | CDQ89_11990 | Q9ERI6 | Positive | 2491867 - 2492814 | 33980.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



