Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CDQ89_01035 | Not Available | Negative | 203001 - 203351 | 12931.2 |
| rna polymerase sigma factor sigm | CDQ89_01040 | P9WKW4 | Negative | 203357 - 204695 | 46493.3 |
| serine--trna ligase | CDQ89_01045 | Q745I8 | Positive | 204814 - 206091 | 45743.3 |
| helix-turn-helix transcriptional regulator | CDQ89_01050 | P76241 | Negative | 206088 - 206837 | 27365.1 |
| methyltransferase domain-containing protein | CDQ89_01055 | P66661 | Positive | 206916 - 207488 | 20573.6 |
| duf2834 domain-containing protein | CDQ89_01060 | Not Available | Negative | 207485 - 207970 | 18146.9 |
| tetr family transcriptional regulator | CDQ89_01065 | P39885 | Positive | 208040 - 208681 | 23465.8 |
| nad(p)/fad-dependent oxidoreductase | CDQ89_01070 | Q68FT3 | Positive | 208726 - 210300 | 55831.9 |
| hypothetical protein | CDQ89_01075 | Not Available | Negative | 210302 - 210637 | 12542.1 |
| mbl fold metallo-hydrolase | CDQ89_01080 | P9WH20 | Negative | 210634 - 212172 | 57268.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



