Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4407 domain-containing protein | CDQ89_11895 | Not Available | Positive | 2473252 - 2475102 | 65325.2 |
| antar domain-containing protein | CDQ89_11900 | Not Available | Negative | 2475334 - 2475621 | 10149.2 |
| rna polymerase sigma factor sigm | CDQ89_11905 | Not Available | Negative | 2475909 - 2476085 | 6444.53 |
| hypothetical protein | CDQ89_11910 | Not Available | Positive | 2476038 - 2476334 | 11075.4 |
| fad-binding protein | CDQ89_11915 | Q4WR24 | Positive | 2476331 - 2478076 | 61922.7 |
| enoyl-coa hydratase | CDQ89_11920 | P77467 | Negative | 2478109 - 2478960 | 32013.8 |
| dead/deah box helicase | CDQ89_11925 | P25888 | Positive | 2479328 - 2480692 | 48228.2 |
| rna polymerase sigma factor sigm | CDQ89_11930 | Not Available | Negative | 2480701 - 2481275 | 19803.2 |
| tetr/acrr family transcriptional regulator | CDQ89_11935 | P9WMD6 | Positive | 2481372 - 2481977 | 21227.4 |
| amidohydrolase family protein | CDQ89_11940 | P9WJH8 | Negative | 2482014 - 2483780 | 65060.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



