Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor sigm | CDQ89_11795 | O53945 | Negative | 2448794 - 2450619 | 63375.9 |
| type vii secretion integral membrane protein eccd | CDQ89_11800 | B2HSU6 | Negative | 2450597 - 2452108 | 53306.1 |
| esx secretion-associated protein espg | CDQ89_11805 | B2HSU5 | Negative | 2452369 - 2453271 | 32307.2 |
| wxg100 family type vii secretion target | CDQ89_11810 | P0A571 | Negative | 2453380 - 2453664 | 9886.4 |
| wxg100 family type vii secretion target | CDQ89_11815 | P9WNJ6 | Negative | 2453707 - 2454003 | 10980.8 |
| pe family protein | CDQ89_11820 | Q79FR3 | Negative | 2454261 - 2454560 | 9508.93 |
| ppe family protein | CDQ89_11825 | Q79FK6 | Negative | 2454957 - 2456180 | 39739.6 |
| pe family protein | CDQ89_11830 | Not Available | Negative | 2456188 - 2456319 | 4212.87 |
| ppe family protein | CDQ89_11835 | P9WI13 | Negative | 2456406 - 2457671 | 41712.6 |
| ferredoxin | CDQ89_11840 | Q83WF4 | Negative | 2458150 - 2458344 | 7136.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



