Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf732 domain-containing protein | CDQ89_11745 | P9WM42 | Negative | 2437709 - 2438017 | 10415.5 |
| duf732 domain-containing protein | CDQ89_11750 | P9WM42 | Negative | 2438107 - 2438445 | 11340.6 |
| ppe family protein | CDQ89_11755 | P0A693 | Negative | 2438480 - 2439883 | 47502.2 |
| ppe family protein | CDQ89_11760 | P9WI05 | Negative | 2439961 - 2441220 | 41246.3 |
| duf732 domain-containing protein | CDQ89_11765 | P9WM32 | Negative | 2442153 - 2442488 | 11322.3 |
| rna polymerase sigma factor sigm | CDQ89_11770 | P9WHX8 | Negative | 2442506 - 2443719 | 41437.4 |
| ppe family protein | CDQ89_11775 | P9WI30 | Negative | 2443739 - 2444869 | 37274.8 |
| pe family protein | CDQ89_11780 | Q79FR3 | Negative | 2444888 - 2445187 | 9878.62 |
| type vii secretion system esx-5 aaa family atpase ecca5 | CDQ89_11785 | P63745 | Negative | 2445737 - 2447569 | 67233.0 |
| type vii secretion protein ecce | CDQ89_11790 | B2HSU8 | Negative | 2447566 - 2448774 | 44187.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



