Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | CDQ89_11645 | P9WME6 | Negative | 2417540 - 2418292 | 26622.9 |
| glycogen accumulation regulator gara | CDQ89_11650 | P9WJA8 | Negative | 2418292 - 2418762 | 16400.7 |
| glycine cleavage system protein gcvh | CDQ89_11655 | A0QGN7 | Negative | 2419082 - 2419480 | 13916.0 |
| duf881 domain-containing protein | CDQ89_11660 | P9WFG2 | Negative | 2419507 - 2420340 | 28737.2 |
| small basic family protein | CDQ89_11665 | P9WLR6 | Negative | 2420348 - 2420680 | 11638.8 |
| duf881 domain-containing protein | CDQ89_11670 | P9WFG0 | Negative | 2420742 - 2421668 | 32093.6 |
| cdp-alcohol phosphatidyltransferase family protein | CDQ89_11675 | P63754 | Negative | 2421661 - 2422290 | 22752.6 |
| accessory sec system translocase seca2 | CDQ89_11680 | Q73ZR7 | Negative | 2422345 - 2424678 | 85008.2 |
| rna polymerase sigma factor sigm | CDQ89_11685 | P66947 | Negative | 2424731 - 2426373 | 57375.5 |
| abc transporter atp-binding protein/permease | CDQ89_11690 | P9WQI8 | Positive | 2426467 - 2428386 | 71248.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



