Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease | CDQ89_11445 | Not Available | Positive | 2367794 - 2368429 | 23262.9 |
| duf72 domain-containing protein | CDQ89_11450 | O32135 | Positive | 2368437 - 2369162 | 27627.6 |
| fad-dependent oxidoreductase | CDQ89_11455 | Q84BZ0 | Positive | 2369209 - 2370441 | 43752.7 |
| nad-dependent epimerase/dehydratase family protein | CDQ89_11460 | P9WIH4 | Negative | 2370446 - 2372569 | 74774.9 |
| acetyl-coa acetyltransferase | CDQ89_11465 | P11915 | Negative | 2372701 - 2374185 | 53185.9 |
| coa transferase | CDQ89_11470 | P95149 | Negative | 2374204 - 2376618 | 86177.0 |
| undecaprenyl-diphosphate phosphatase | CDQ89_11475 | P60939 | Positive | 2376838 - 2377755 | 32551.1 |
| sdr family oxidoreductase | CDQ89_11480 | P66778 | Positive | 2377852 - 2378700 | 29893.1 |
| phosphoketolase family protein | CDQ89_11485 | Q73ZM8 | Positive | 2378745 - 2381159 | 89282.9 |
| rna polymerase sigma factor sigm | CDQ89_11490 | Not Available | Positive | 2381263 - 2382018 | 26034.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



