Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase | CDQ89_00985 | Not Available | Negative | 195087 - 195620 | 18481.3 |
| superoxide dismutase | CDQ89_00990 | P47201 | Negative | 195778 - 196401 | 23073.0 |
| hypothetical protein | CDQ89_00995 | Not Available | Negative | 196562 - 196717 | 5093.21 |
| duf4328 domain-containing protein | CDQ89_01000 | Not Available | Positive | 197414 - 198145 | 25953.9 |
| glycerophosphodiester phosphodiesterase | CDQ89_01005 | P9WMU2 | Positive | 198150 - 198968 | 29730.5 |
| lcp family protein | CDQ89_01010 | Q8NLN8 | Negative | 198965 - 199918 | 33343.5 |
| rna polymerase sigma factor sigm | CDQ89_01015 | Not Available | Negative | 200220 - 201018 | 27589.5 |
| prephenate dehydratase | CDQ89_01020 | A0Q994 | Positive | 201106 - 202053 | 32563.6 |
| histidine phosphatase family protein | CDQ89_01025 | Q11CB5 | Positive | 202050 - 202745 | 25088.6 |
| hypothetical protein | CDQ89_01030 | Not Available | Negative | 202755 - 202946 | 6859.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



