Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CDQ89_11395 | Not Available | Negative | 2358475 - 2359176 | 25433.3 |
| hydrogen peroxide-inducible genes activator | CDQ89_11400 | P52677 | Negative | 2359213 - 2360145 | 32319.2 |
| peroxiredoxin | CDQ89_11405 | P9WQB6 | Positive | 2360261 - 2360848 | 21642.4 |
| alkyl hydroperoxide reductase | CDQ89_11410 | Q73ZL4 | Positive | 2360888 - 2361424 | 18843.4 |
| duf3459 domain-containing protein | CDQ89_11415 | P38940 | Positive | 2361435 - 2362769 | 49892.8 |
| duf1810 domain-containing protein | CDQ89_11420 | Not Available | Negative | 2362766 - 2363203 | 16259.3 |
| alpha-hydroxy-acid oxidizing protein | CDQ89_11425 | P9WND4 | Positive | 2363222 - 2364484 | 46210.1 |
| endopeptidase la | CDQ89_11430 | O31147 | Positive | 2364582 - 2366915 | 83333.6 |
| nitroreductase family deazaflavin-dependent oxidoreductase | CDQ89_11435 | P9WP12 | Positive | 2366989 - 2367378 | 14653.9 |
| tfox/sxy family protein | CDQ89_11440 | Not Available | Positive | 2367419 - 2367751 | 11729.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



