Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycei family protein | CDQ89_11295 | Not Available | Positive | 2340427 - 2340993 | 20220.9 |
| hypothetical protein | CDQ89_11300 | Not Available | Negative | 2341010 - 2342161 | 39803.1 |
| esterase family protein | CDQ89_11305 | Q06947 | Positive | 2342728 - 2343720 | 34694.7 |
| chorismate mutase | CDQ89_11310 | P9WIB8 | Positive | 2343831 - 2344394 | 19921.5 |
| transglycosylase family protein | CDQ89_11315 | O07747 | Positive | 2344500 - 2344937 | 15152.0 |
| srpbcc family protein | CDQ89_11320 | Not Available | Positive | 2344991 - 2345452 | 17078.4 |
| sdr family oxidoreductase | CDQ89_11325 | Q7A3L9 | Positive | 2345449 - 2346282 | 29998.0 |
| lipoprotein lpqh | CDQ89_11330 | O07750 | Positive | 2346295 - 2346717 | 14990.9 |
| rna polymerase sigma factor sigm | CDQ89_11335 | P63722 | Positive | 2346825 - 2347784 | 34601.5 |
| nuclear transport factor 2 family protein | CDQ89_11340 | Not Available | Positive | 2347833 - 2348276 | 16401.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



