Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CDQ89_11195 | Not Available | Negative | 2322708 - 2322944 | 8694.35 |
| rna polymerase sigma factor sigm | CDQ89_11200 | Not Available | Positive | 2322968 - 2323111 | 5590.63 |
| hypothetical protein | CDQ89_11205 | P9WM14 | Positive | 2323222 - 2323848 | 19891.3 |
| fad-binding oxidoreductase | CDQ89_11210 | P9WP26 | Positive | 2323879 - 2324844 | 34699.4 |
| phage holin family protein | CDQ89_11215 | Q53868 | Negative | 2324847 - 2325236 | 14442.4 |
| amidohydrolase | CDQ89_11220 | Q8R5M5 | Negative | 2325282 - 2326349 | 39498.9 |
| mfs transporter | CDQ89_11225 | P36035 | Positive | 2326453 - 2327700 | 45814.7 |
| competence/damage-inducible protein a | CDQ89_11230 | Q73ZH8 | Negative | 2327778 - 2329082 | 45772.1 |
| mth1187 family thiamine-binding protein | CDQ89_11235 | P9WFQ0 | Negative | 2329142 - 2329447 | 10717.8 |
| d-tyrosyl-trna(tyr) deacylase | CDQ89_11240 | Q73ZI0 | Positive | 2329530 - 2329961 | 15030.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



