Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybhb/ybcl family raf kinase inhibitor-like protein | CDQ89_11145 | P9WFN4 | Positive | 2314841 - 2315449 | 19816.3 |
| ubid family decarboxylase | CDQ89_11150 | Q7DBA7 | Positive | 2315764 - 2317185 | 51373.6 |
| hypothetical protein | CDQ89_11155 | Not Available | Positive | 2317229 - 2317711 | 17374.3 |
| ubix family flavin prenyltransferase | CDQ89_11160 | Q9X696 | Positive | 2317708 - 2318331 | 22395.4 |
| lysr family transcriptional regulator | CDQ89_11165 | P52678 | Negative | 2318314 - 2319231 | 32547.3 |
| hypothetical protein | CDQ89_11170 | Not Available | Positive | 2319450 - 2319749 | 10881.2 |
| doxx family protein | CDQ89_11175 | Not Available | Positive | 2319746 - 2320108 | 12149.4 |
| rna polymerase sigma factor sigm | CDQ89_11180 | Not Available | Negative | 2320189 - 2320292 | 4274.14 |
| mfs transporter | CDQ89_11185 | P11545 | Positive | 2320550 - 2322031 | 50478.4 |
| tetr/acrr family transcriptional regulator | CDQ89_11190 | P67431 | Positive | 2322066 - 2322743 | 24616.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



