Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | CDQ89_11095 | P87219 | Positive | 2304341 - 2305111 | 27139.8 |
| hypothetical protein | CDQ89_11100 | Not Available | Negative | 2305145 - 2305813 | 24869.6 |
| amp-binding protein | CDQ89_11105 | A0R618 | Negative | 2305867 - 2307705 | 65387.6 |
| srpbcc family protein | CDQ89_11110 | Not Available | Positive | 2307886 - 2308353 | 16684.9 |
| llm class flavin-dependent oxidoreductase | CDQ89_11115 | Q9EUT9 | Negative | 2308395 - 2309558 | 42100.1 |
| isocitrate lyase family protein | CDQ89_11120 | Q7TZA8 | Negative | 2310194 - 2312482 | 85218.0 |
| mbl fold metallo-hydrolase | CDQ89_11125 | P25910 | Negative | 2312701 - 2313414 | 25343.0 |
| winged helix-turn-helix transcriptional regulator | CDQ89_11130 | O53478 | Positive | 2313523 - 2313849 | 12529.3 |
| srpbcc domain-containing protein | CDQ89_11135 | O31806 | Positive | 2313846 - 2314253 | 15444.5 |
| srpbcc family protein | CDQ89_11140 | Not Available | Positive | 2314304 - 2314753 | 16765.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



