Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CDQ89_11045 | Not Available | Positive | 2296030 - 2296284 | 9228.53 |
| rna polymerase sigma factor sigm | CDQ89_11050 | A0A2I7G3B0 | Negative | 2296305 - 2297760 | 52711.7 |
| nad-dependent epimerase/dehydratase family protein | CDQ89_11055 | Not Available | Negative | 2297888 - 2298790 | 32261.5 |
| acyl-coa dehydrogenase | CDQ89_11060 | B0FXI0 | Negative | 2298842 - 2300026 | 42474.2 |
| nyn domain-containing protein | CDQ89_11065 | Not Available | Positive | 2300113 - 2300472 | 12984.3 |
| nitronate monooxygenase | CDQ89_11070 | Q9I4V0 | Positive | 2300469 - 2301431 | 33000.9 |
| thiol peroxidase | CDQ89_11075 | P66953 | Negative | 2301444 - 2301938 | 16685.7 |
| glxa family transcriptional regulator | CDQ89_11080 | P95283 | Positive | 2302060 - 2303010 | 33901.5 |
| dj-1/pfpi family protein | CDQ89_11085 | Q8G9F9 | Positive | 2303044 - 2303787 | 26099.2 |
| nuclear transport factor 2 family protein | CDQ89_11090 | Not Available | Negative | 2303788 - 2304264 | 17881.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



