Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mosc domain-containing protein | CDQ89_10945 | Q9CW42 | Negative | 2274603 - 2275442 | 29986.8 |
| hypothetical protein | CDQ89_10950 | P9WM46 | Negative | 2275523 - 2276290 | 26196.8 |
| ppe domain-containing protein | CDQ89_10955 | P9WI08 | Negative | 2276385 - 2277770 | 46326.6 |
| rna polymerase sigma factor sigm | CDQ89_10960 | P9WN06 | Positive | 2278230 - 2279400 | 41218.1 |
| class i sam-dependent methyltransferase | CDQ89_10965 | B6J5Y2 | Positive | 2279459 - 2280508 | 38544.5 |
| fad-dependent oxidoreductase | CDQ89_10970 | O07622 | Negative | 2280514 - 2282019 | 53790.8 |
| hypothetical protein | CDQ89_10975 | Not Available | Negative | 2282079 - 2282870 | 28611.3 |
| l,d-transpeptidase | CDQ89_10980 | O53223 | Positive | 2282993 - 2284276 | 45463.6 |
| transcriptional repressor | CDQ89_10985 | P0A583 | Positive | 2284370 - 2284810 | 15751.6 |
| catalase/peroxidase hpi | CDQ89_10990 | Q73ZD5 | Positive | 2284847 - 2287093 | 81793.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



