Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CDQ89_10895 | Not Available | Positive | 2262908 - 2263090 | 6611.29 |
| hypothetical protein | CDQ89_10900 | Not Available | Negative | 2263116 - 2264093 | 35261.7 |
| hypothetical protein | CDQ89_10905 | Q5YTV5 | Negative | 2264170 - 2265681 | 54307.9 |
| atp-dependent rna helicase hrpa | CDQ89_10910 | P43329 | Negative | 2265761 - 2269705 | 146108.0 |
| ggdef domain-containing protein | CDQ89_10915 | P36892 | Positive | 2269890 - 2270873 | 34373.9 |
| yihy/virulence factor brkb family protein | CDQ89_10920 | Not Available | Positive | 2270949 - 2271971 | 36076.5 |
| enoyl-coa hydratase/isomerase family protein | CDQ89_10925 | Q9KJE7 | Positive | 2272030 - 2272803 | 28225.8 |
| cutinase family protein | CDQ89_10930 | P63880 | Positive | 2272860 - 2273522 | 22395.2 |
| duf1345 domain-containing protein | CDQ89_10935 | Not Available | Positive | 2273535 - 2274194 | 23138.4 |
| hypothetical protein | CDQ89_10940 | Not Available | Positive | 2274227 - 2274481 | 8943.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



