Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hsp20 family protein | CDQ89_10845 | P46731 | Positive | 2254902 - 2255345 | 16452.6 |
| helix-turn-helix transcriptional regulator | CDQ89_10850 | P40183 | Negative | 2255406 - 2255786 | 13948.6 |
| hsp20 family protein | CDQ89_10855 | P46731 | Positive | 2255899 - 2256318 | 15907.9 |
| rna polymerase sigma factor sigm | CDQ89_10860 | Not Available | Negative | 2256581 - 2256655 | 2809.4 |
| rna polymerase sigma factor sigm | CDQ89_10865 | Not Available | Positive | 2256711 - 2257112 | 14275.1 |
| methyltransferase domain-containing protein | CDQ89_10870 | P9WK00 | Positive | 2257157 - 2257924 | 28337.8 |
| osmoprotectant naggn system m42 family peptidase | CDQ89_10875 | O07603 | Negative | 2257944 - 2259179 | 44331.5 |
| coa ester lyase | CDQ89_10880 | A4WNM9 | Negative | 2259262 - 2260143 | 30979.8 |
| class i sam-dependent methyltransferase | CDQ89_10885 | A0QG83 | Positive | 2260312 - 2261235 | 34112.1 |
| rna polymerase sigma factor sigm | CDQ89_10890 | Q9Z3S2 | Negative | 2261249 - 2262767 | 55874.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



