Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase family peroxidase | CDQ89_10695 | Q55025 | Positive | 2226322 - 2227350 | 36564.1 |
| cytochrome b | CDQ89_10700 | Q9X6B2 | Positive | 2227383 - 2227940 | 20658.2 |
| nad(p)-binding domain-containing protein | CDQ89_10705 | Q5RKL5 | Negative | 2228290 - 2228892 | 20862.9 |
| is110 family transposase | CDQ89_10710 | P14322 | Negative | 2228989 - 2230209 | 44027.1 |
| tetr/acrr family transcriptional regulator | CDQ89_10715 | Q0S7V2 | Positive | 2230507 - 2231178 | 24220.9 |
| hypothetical protein | CDQ89_10720 | P96683 | Positive | 2231339 - 2231614 | 10418.7 |
| hypothetical protein | CDQ89_10725 | Not Available | Negative | 2232367 - 2232606 | 8404.28 |
| sdr family oxidoreductase | CDQ89_10730 | Q9Y7K4 | Negative | 2233128 - 2234051 | 31460.1 |
| tetr/acrr family transcriptional regulator | CDQ89_10735 | Q7A3C7 | Positive | 2234130 - 2234744 | 21752.9 |
| duf1942 domain-containing protein | CDQ89_10740 | Not Available | Positive | 2234873 - 2235328 | 15519.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



