Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | CDQ89_10545 | L0TCG5 | Positive | 2197348 - 2198280 | 33506.4 |
| sugar abc transporter substrate-binding protein | CDQ89_10550 | Q53684 | Positive | 2198346 - 2199674 | 47900.7 |
| sugar abc transporter permease | CDQ89_10555 | O31519 | Positive | 2199671 - 2200615 | 34545.0 |
| carbohydrate abc transporter permease | CDQ89_10560 | O31520 | Positive | 2200602 - 2201444 | 31115.0 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | CDQ89_10565 | Q9L0Q1 | Positive | 2201447 - 2202517 | 38927.3 |
| patatin-like phospholipase family protein | CDQ89_10570 | P54513 | Positive | 2202525 - 2203493 | 34484.1 |
| duf3349 domain-containing protein | CDQ89_10575 | Not Available | Negative | 2203519 - 2203806 | 10449.7 |
| duf3097 domain-containing protein | CDQ89_10580 | Not Available | Positive | 2204040 - 2204873 | 30288.3 |
| rna polymerase sigma factor sigm | CDQ89_10585 | Q0TJ50 | Positive | 2204964 - 2206575 | 56486.6 |
| efem/efeo family lipoprotein | CDQ89_10590 | Q9K1P6 | Positive | 2206706 - 2207788 | 37947.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



