Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vii secretion protein ecce | CDQ89_00885 | P9WJE6 | Positive | 171575 - 173161 | 57042.1 |
| type vii secretion system esx-2 aaa family atpase ecca2 | CDQ89_00890 | P59976 | Positive | 173191 - 175029 | 67146.9 |
| nitroreductase family deazaflavin-dependent oxidoreductase | CDQ89_00895 | Not Available | Negative | 175043 - 175483 | 15837.4 |
| nad(p)h-binding protein | CDQ89_00900 | B1VN94 | Negative | 175485 - 176345 | 30037.0 |
| rna polymerase sigma factor sigi | CDQ89_00905 | P9WGH2 | Positive | 176458 - 177315 | 30732.8 |
| mind/para family protein | CDQ89_00910 | P9WJC4 | Negative | 177312 - 178217 | 32823.0 |
| glutamate synthase large subunit | CDQ89_00915 | P96218 | Positive | 179076 - 183659 | 166193.0 |
| glutamate synthase subunit beta | CDQ89_00920 | P9WN18 | Positive | 183652 - 185127 | 53509.8 |
| llm class f420-dependent oxidoreductase | CDQ89_00925 | P9WKN4 | Negative | 185489 - 186340 | 31041.7 |
| hypothetical protein | CDQ89_00930 | Not Available | Positive | 186392 - 186832 | 15843.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



