Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp phosphoribosyltransferase | CDQ89_10145 | A0QFA5 | Positive | 2103995 - 2104849 | 30543.5 |
| duf4126 domain-containing protein | CDQ89_10150 | Not Available | Positive | 2104999 - 2105511 | 17381.8 |
| fad-containing oxidoreductase | CDQ89_10155 | P77212 | Positive | 2105536 - 2106906 | 48739.9 |
| recb family exonuclease | CDQ89_10160 | Q05283 | Negative | 2106903 - 2107808 | 33182.7 |
| trna (adenine-n1)-methyltransferase | CDQ89_10165 | P9WFZ0 | Positive | 2107884 - 2108729 | 30557.8 |
| duf503 domain-containing protein | CDQ89_10170 | P32730 | Negative | 2108743 - 2109042 | 10912.1 |
| hypothetical protein | CDQ89_10175 | P65301 | Negative | 2109051 - 2109665 | 20674.1 |
| proteasome atpase | CDQ89_10180 | A0QFB2 | Positive | 2109984 - 2111813 | 67579.1 |
| hypothetical protein | CDQ89_10185 | Not Available | Negative | 2111927 - 2112571 | 23249.6 |
| pup deamidase/depupylase | CDQ89_10190 | P9WNU8 | Positive | 2112665 - 2114173 | 54757.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



