Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-dimethylarginine dimethylaminohydrolase | CDQ89_08845 | P71889 | Positive | 1812267 - 1813136 | 31576.1 |
| rna polymerase sigma factor sigm | CDQ89_08850 | Q89RB7 | Positive | 1813133 - 1814370 | 43999.3 |
| amino acid permease | CDQ89_08855 | O07576 | Positive | 1814399 - 1815850 | 50583.2 |
| extracellular solute-binding protein | CDQ89_08860 | Q578M8 | Negative | 1815856 - 1817193 | 47546.8 |
| carbohydrate abc transporter permease | CDQ89_08865 | Q9KEE9 | Negative | 1817190 - 1818017 | 29889.4 |
| sugar abc transporter permease | CDQ89_08870 | Q7CRU3 | Negative | 1818004 - 1818888 | 31727.4 |
| tldd/pmba family protein | CDQ89_08875 | O26944 | Positive | 1818947 - 1820464 | 54671.2 |
| tldd/pmba family protein | CDQ89_08880 | Not Available | Positive | 1820461 - 1821834 | 48321.3 |
| carboxymuconolactone decarboxylase family protein | CDQ89_08885 | P9WLB6 | Positive | 1821875 - 1822741 | 31231.9 |
| hypothetical protein | CDQ89_08890 | Not Available | Positive | 1822996 - 1823418 | 15142.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



