Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | CDQ89_08445 | P71668 | Negative | 1723753 - 1724712 | 33838.9 |
| lysoplasmalogenase | CDQ89_08450 | P64838 | Positive | 1724711 - 1725502 | 27634.4 |
| rna polymerase sigma factor sigm | CDQ89_08455 | Q9CCQ3 | Positive | 1725587 - 1727552 | 68846.4 |
| marr family transcriptional regulator | CDQ89_08460 | P27245 | Positive | 1727680 - 1728165 | 17075.7 |
| methyltransferase domain-containing protein | CDQ89_08465 | P9WLY6 | Negative | 1728171 - 1728995 | 29126.8 |
| methionyl-trna formyltransferase | CDQ89_08470 | Q741F8 | Positive | 1729153 - 1730100 | 33260.3 |
| 16s rrna m5c967 methyltransferase | CDQ89_08475 | P9WGX2 | Positive | 1730097 - 1731491 | 49401.1 |
| ribulose-phosphate 3-epimerase | CDQ89_08480 | P65761 | Positive | 1731595 - 1732302 | 24737.6 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | CDQ89_08485 | P9WPH0 | Positive | 1732299 - 1733324 | 35400.3 |
| mfs transporter | CDQ89_08490 | Q7U042 | Negative | 1733321 - 1734877 | 55090.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



