Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3558 domain-containing protein | CDQ89_06995 | Q7U093 | Positive | 1424569 - 1425126 | 19435.8 |
| duf3558 domain-containing protein | CDQ89_07000 | Not Available | Positive | 1425123 - 1425692 | 20165.3 |
| histidine phosphatase family protein | CDQ89_07005 | P9WGF8 | Negative | 1425719 - 1426222 | 17689.2 |
| hnh endonuclease | CDQ89_07010 | P9WLT2 | Negative | 1426254 - 1427672 | 50336.4 |
| exonuclease sbccd subunit d | CDQ89_07015 | O29231 | Positive | 1427932 - 1429083 | 41224.8 |
| aaa family atpase | CDQ89_07020 | P9WM40 | Positive | 1429080 - 1431710 | 93125.2 |
| alpha/beta hydrolase | CDQ89_07025 | P93732 | Positive | 1431774 - 1433018 | 44870.6 |
| abc transporter family substrate-binding protein | CDQ89_07030 | P9WGU4 | Negative | 1433005 - 1434681 | 59584.4 |
| rna polymerase sigma factor sigm | CDQ89_07035 | P9WQJ4 | Negative | 1434692 - 1436526 | 65516.1 |
| abc transporter permease | CDQ89_07040 | P9WFZ8 | Negative | 1436523 - 1437398 | 31226.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



