Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase | CDQ89_06945 | P63493 | Positive | 1411344 - 1412729 | 48795.4 |
| dna-deoxyinosine glycosylase | CDQ89_06950 | Q46EH7 | Negative | 1412726 - 1413223 | 18137.8 |
| adenylate/guanylate cyclase domain-containing protein | CDQ89_06955 | P9WMU8 | Positive | 1413222 - 1414379 | 41479.0 |
| hypothetical protein | CDQ89_06960 | P9WM48 | Positive | 1414669 - 1415244 | 21380.0 |
| protein kinase | CDQ89_06965 | Q7U095 | Negative | 1415291 - 1417105 | 64296.3 |
| fha domain-containing protein | CDQ89_06970 | P66800 | Negative | 1417203 - 1418348 | 41817.9 |
| is1182 family transposase | CDQ89_06975 | Not Available | Negative | 1418622 - 1420169 | 56053.6 |
| duf732 domain-containing protein | CDQ89_06980 | P9WM42 | Negative | 1420235 - 1420570 | 11373.7 |
| abc transporter atp-binding protein | CDQ89_06985 | P63398 | Negative | 1420717 - 1422633 | 68533.0 |
| abc transporter atp-binding protein | CDQ89_06990 | P9WQJ1 | Negative | 1422630 - 1424387 | 62720.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



