Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor sigm | CDQ89_06595 | Q79FR3 | Positive | 1331138 - 1331972 | 27608.5 |
| ppe family protein | CDQ89_06600 | P9WI30 | Positive | 1331998 - 1333149 | 37526.2 |
| succinyl-diaminopimelate desuccinylase | CDQ89_06605 | P9WHS8 | Positive | 1333199 - 1334263 | 36979.6 |
| aaa family atpase | CDQ89_06610 | Not Available | Negative | 1334248 - 1336386 | 74182.5 |
| tigr00730 family rossman fold protein | CDQ89_06615 | O05306 | Positive | 1336475 - 1337038 | 19659.6 |
| long-chain-acyl-coa synthetase | CDQ89_06620 | O05307 | Positive | 1337149 - 1338927 | 63851.8 |
| dihydropteroate synthase | CDQ89_06625 | P64140 | Positive | 1338983 - 1339858 | 30710.6 |
| glucosyl-3-phosphoglycerate synthase | CDQ89_06630 | Q73WU1 | Positive | 1339855 - 1340844 | 34768.6 |
| diviva domain-containing protein | CDQ89_06635 | Not Available | Positive | 1340897 - 1341247 | 12205.6 |
| dna-3-methyladenine glycosylase i | CDQ89_06640 | P05100 | Positive | 1341250 - 1341831 | 21303.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



