Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | CDQ89_00485 | P9WJY1 | Positive | 97520 - 98791 | 44168.8 |
| tigr03084 family protein | CDQ89_00490 | P9WM90 | Positive | 98849 - 99589 | 26062.0 |
| duf2710 family protein | CDQ89_00495 | P9WM94 | Negative | 99623 - 99940 | 11229.1 |
| duf5632 domain-containing protein | CDQ89_00500 | Q10690 | Negative | 99998 - 101662 | 59280.7 |
| hypothetical protein | CDQ89_00505 | P0DMM2 | Positive | 101745 - 101888 | 5125.12 |
| duf2694 family protein | CDQ89_00510 | P9WM96 | Negative | 101922 - 102233 | 11026.2 |
| esx-1 secretion-associated protein | CDQ89_00515 | P9WM98 | Negative | 102230 - 102547 | 11703.5 |
| duf4226 domain-containing protein | CDQ89_00520 | P9WMB0 | Negative | 102598 - 104049 | 48751.1 |
| duf4226 domain-containing protein | CDQ89_00525 | P9WMA0 | Negative | 104165 - 104527 | 13035.2 |
| c40 family peptidase | CDQ89_00530 | P9WHU2 | Negative | 104576 - 105400 | 29550.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



