Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1059 domain-containing protein | CDQ89_06345 | Not Available | Positive | 1266164 - 1266310 | 5332.37 |
| rna polymerase sigma factor sigm | CDQ89_06350 | Not Available | Negative | 1266374 - 1267457 | 40913.2 |
| rna polymerase sigma factor sigm | CDQ89_06355 | Not Available | Negative | 1267505 - 1268200 | 23744.2 |
| mannosyltransferase | CDQ89_06360 | P9WN00 | Positive | 1268338 - 1269651 | 46994.7 |
| 4a-hydroxytetrahydrobiopterin dehydratase | CDQ89_06365 | P61733 | Negative | 1269714 - 1269998 | 10414.2 |
| cell division protein diviva | CDQ89_06370 | Not Available | Negative | 1270129 - 1270902 | 28460.5 |
| (deoxy)nucleoside triphosphate pyrophosphohydrolase | CDQ89_06375 | P9WIY0 | Positive | 1271072 - 1271464 | 14214.2 |
| nitrate reductase subunit alpha | CDQ89_06380 | P9WJQ2 | Positive | 1271882 - 1275571 | 135875.0 |
| nitrate reductase subunit beta | CDQ89_06385 | P42176 | Positive | 1275573 - 1277189 | 60603.6 |
| nitrate reductase molybdenum cofactor assembly chaperone | CDQ89_06390 | P9WJQ0 | Positive | 1277246 - 1277869 | 22168.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



