Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase family protein | CDQ89_06245 | H8ZPX2 | Positive | 1247732 - 1249216 | 53278.6 |
| thiolase family protein | CDQ89_06250 | I6XHJ3 | Positive | 1249671 - 1250819 | 39820.8 |
| crotonase/enoyl-coa hydratase family protein | CDQ89_06255 | B5F749 | Positive | 1250816 - 1251607 | 27847.3 |
| nad(p)/fad-dependent oxidoreductase | CDQ89_06260 | A0QRI8 | Negative | 1251617 - 1252621 | 35661.1 |
| isoprenylcysteine carboxyl methyltransferase family protein | CDQ89_06265 | P54158 | Negative | 1252668 - 1253168 | 18637.1 |
| type iii polyketide synthase | CDQ89_06270 | Q7VEV2 | Negative | 1253189 - 1254238 | 37067.4 |
| nad(p)h-binding protein | CDQ89_06275 | P75822 | Positive | 1254524 - 1255672 | 40192.6 |
| cpbp family intramembrane metalloprotease | CDQ89_06280 | Not Available | Positive | 1255669 - 1256391 | 25388.7 |
| rna polymerase sigma factor sigm | CDQ89_06285 | P77467 | Negative | 1256425 - 1257238 | 27635.5 |
| coa transferase | CDQ89_06290 | O06543 | Positive | 1257358 - 1258440 | 38575.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



