Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| llm class f420-dependent oxidoreductase | CDQ89_00435 | P9WKN4 | Positive | 86639 - 87418 | 28643.8 |
| gntr family transcriptional regulator | CDQ89_00440 | P9WMG8 | Positive | 87537 - 88268 | 26970.1 |
| abc transporter permease subunit | CDQ89_00445 | P54536 | Positive | 88319 - 90127 | 63511.1 |
| amino acid abc transporter atp-binding protein | CDQ89_00450 | P27675 | Positive | 90124 - 90870 | 26896.5 |
| marr family transcriptional regulator | CDQ89_00455 | P9WMF0 | Positive | 90937 - 91440 | 17657.4 |
| sdr family oxidoreductase | CDQ89_00460 | A0A1U8QWA2 | Positive | 91499 - 92170 | 23380.8 |
| leucine--trna ligase | CDQ89_00465 | Q744V3 | Negative | 92177 - 95086 | 106880.0 |
| hypothetical protein | CDQ89_00470 | O33075 | Positive | 95271 - 96356 | 36180.3 |
| hypothetical protein | CDQ89_00475 | P9WM88 | Positive | 96412 - 96753 | 10961.5 |
| yqge/algh family protein | CDQ89_00480 | Q744T3 | Negative | 96769 - 97374 | 21740.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



