Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor sigm | CDQ89_00385 | P71707 | Negative | 75327 - 77878 | 92508.3 |
| duf5318 domain-containing protein | CDQ89_00390 | P9WM84 | Negative | 77945 - 78382 | 16172.6 |
| duf1707 domain-containing protein | CDQ89_00395 | P9WM86 | Positive | 78504 - 79388 | 30729.3 |
| helix-turn-helix transcriptional regulator | CDQ89_00400 | C0H3S6 | Positive | 79535 - 80077 | 20460.5 |
| inositol-3-phosphate synthase | CDQ89_00405 | P9WKI0 | Positive | 80137 - 81243 | 40214.7 |
| llm class flavin-dependent oxidoreductase | CDQ89_00410 | Q7TXK4 | Positive | 81375 - 82502 | 41179.2 |
| sulfotransferase | CDQ89_00415 | P64964 | Positive | 82499 - 83668 | 44344.9 |
| sugar phosphate isomerase/epimerase | CDQ89_00420 | Not Available | Positive | 83670 - 84473 | 28294.1 |
| duf1214 domain-containing protein | CDQ89_00425 | Not Available | Positive | 84476 - 85684 | 45403.4 |
| alpha/beta hydrolase | CDQ89_00430 | I6XU97 | Positive | 85708 - 86622 | 32568.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



